Bump furo from 2024.04.27 to 2025.7.19 in /docs - #7
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Bumps [furo](https://github.com/pradyunsg/furo) from 2024.04.27 to 2025.7.19. - [Release notes](https://github.com/pradyunsg/furo/releases) - [Changelog](https://github.com/pradyunsg/furo/blob/main/docs/changelog.md) - [Commits](pradyunsg/furo@2024.04.27...2025.07.19) --- updated-dependencies: - dependency-name: furo dependency-version: 2025.7.19 dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com>
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OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting If you change your mind, just re-open this PR and I'll resolve any conflicts on it. |
cshenry
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Jun 3, 2026
Fix #1: Replace kbu.env.config.get() with kbu.env.get_config_value("section.key") throughout all skill files; document get_config(section, key) as deprecated/INI-compat. Verified against shared_env_utils.py:195,216. Fix #2: Replace fabricated KBJobUtils methods (submit, cancel, refresh, get, list, forget, summary, get_logs with real API (run_job, cancel_job, check_job, refresh_active, refresh_all, get_record, list_active, list_all, get_job_logs, cleanup). Verified against kb_job_utils/utils.py. Fix #3: Add undocumented kb_genome_utils.py methods to module-reference.md and api-summary.md: load_kbase_gene_container, object_to_features, get_ftr, ftr_to_aliases, alias_to_ftrs, object_to_proteins, add_annotations_to_object, load_genome_from_local_files, aggregate_taxonomies, create_synthetic_genome, calculate_gc_content, plus PRD-new methods by name: save_genome_object, save_assembly_from_fasta, save_genome_with_assembly, validate_genome, build_genome_from_fasta_gff. Fix #4: Add Injecting SDK Clients in Notebook Contexts subsection to patterns.md documenting kbu.callback.set_callback_client(name, client) injection hook. Fix #5: Add installed_clients/ shipping constraint note near top of kbutillib-expert.md flagging that AssemblyUtilClient/GenomeFileUtilClient require a separate KBase SDK install; calls raise ImportError without it. Fix #6: Add /kbase-genome-expert to Related Skills in kbutillib-expert.md and a See also pointer in patterns.md callback section. Fix #7: Add KBGenomeUtilsImpl delegate note to module-reference.md (source L805, __getattr__ passthrough). Fix #8: Add ## CLI chapter to api-summary.md covering kbu jobs status/list/summary/ refresh/logs/cancel/forget/cleanup/chain submit/list/status/cancel/advance and kbu jobdaemon. All subcommands verified against src/kbutillib/cli/jobs.py, jobdaemon.py, __init__.py. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> EOF )
cshenry
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Jul 6, 2026
Implements shared TOML I/O helpers in manifest.py (read/write for both project and subproject manifests, now_utc_iso, sha256_file, partial-write helpers append_session_ref and append_notebook_entry_or_update). Adds kbu subproject subcommand group with 8-state machine (plan → p-review → build → b-review → run → synthesize → s-review → complete), full precondition validators per PRD round-2 confront table, HTML verdict comment parser, and subcommands: create, list, status, advance, set-status. Registers subproject group in CLI __init__.py; adds tomli-w >=1.0 to dependencies; adds conftest.py fixtures and 66 passing tests. Satisfies PRD kbu-start-v1 ACs #4, #5, #6, #7, #8, #32, #33, #34, #36, #42, #44. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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Bumps furo from 2024.04.27 to 2025.7.19.
Changelog
Sourced from furo's changelog.
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e2cbfcePrepare release: 2025.07.192753741Update changelog5dc72a3Prefetch the sidebar logos01eb613Use@use variables as *0dab870Modernise Sass and use@use+@forward6a76aa7Silence mypy on pygments attributes7d57173Use distinct images for light and dark mode007374aDrop the URL to unsplash03c8880Make current page section detection resilient to sticky elements above header...ff34139Fix flickering header drop shadow (#884)Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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