[pre-commit.ci] pre-commit autoupdate - #1149
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updates: - [github.com/biomejs/pre-commit: v2.4.9 → v2.4.10](biomejs/pre-commit@v2.4.9...v2.4.10) - [github.com/tox-dev/pyproject-fmt: v2.20.0 → v2.21.0](tox-dev/pyproject-fmt@v2.20.0...v2.21.0) - [github.com/astral-sh/ruff-pre-commit: v0.15.8 → v0.15.9](astral-sh/ruff-pre-commit@v0.15.8...v0.15.9)
for more information, see https://pre-commit.ci
Codecov Report✅ All modified and coverable lines are covered by tests. Additional details and impacted files@@ Coverage Diff @@
## main #1149 +/- ##
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Coverage 74.05% 74.05%
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Files 39 39
Lines 6495 6495
Branches 1122 1122
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Hits 4810 4810
Misses 1230 1230
Partials 455 455 🚀 New features to boost your workflow:
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selmanozleyen
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Apr 13, 2026
* [pre-commit.ci] pre-commit autoupdate updates: - [github.com/biomejs/pre-commit: v2.4.9 → v2.4.10](biomejs/pre-commit@v2.4.9...v2.4.10) - [github.com/tox-dev/pyproject-fmt: v2.20.0 → v2.21.0](tox-dev/pyproject-fmt@v2.20.0...v2.21.0) - [github.com/astral-sh/ruff-pre-commit: v0.15.8 → v0.15.9](astral-sh/ruff-pre-commit@v0.15.8...v0.15.9) * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
timtreis
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Jun 1, 2026
* init * doc clarifications * don't expose the builders * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * deduplicate * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * arrange builders * better behaviour * move classes * cleanup * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * add docs * remove leftover * resolution in reolve func * reduce dup code * deprecate invalid n_neighs * expose new functions and deprecate the flat one * move branches to classes * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * remove radius abstraction * add extensibility page * unprivate methods and add extensibility page * give a better example * apply signature suggestion * reorganize abstractions * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * remove unnecessary abstraction * put the warning in resolve graph builder code * remove n_neighs from RadiusBuilder * definition of Adj, Dst and rename to adj, dst * Generalize the base class for extensibility * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * update docs * clarify delauney vs grid * dtype rec * be a bit more verbose on funcitons * spatial_neighbours_from_builder * update docs to refer to each other * refer to the classes properly * mark as TODO's * rename sugg * add combine into API * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * update docs * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * [pre-commit.ci] pre-commit autoupdate (#1149) * [pre-commit.ci] pre-commit autoupdate updates: - [github.com/biomejs/pre-commit: v2.4.9 → v2.4.10](biomejs/pre-commit@v2.4.9...v2.4.10) - [github.com/tox-dev/pyproject-fmt: v2.20.0 → v2.21.0](tox-dev/pyproject-fmt@v2.20.0...v2.21.0) - [github.com/astral-sh/ruff-pre-commit: v0.15.8 → v0.15.9](astral-sh/ruff-pre-commit@v0.15.8...v0.15.9) * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> * Functions to QC histopathology images (#1036) * remove coord_type abstraction * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * make builder positional consistently * make more abstractions * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * graphmatrixT exposure * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * add radius: float | int | tuple t * 4 or 6 * mark snn as ilustrative * add uns params * deprecation warnings alignment * set diag isnt defaulted to none * fix * radius is also positional * n_neighs on grid mode * make radius kw only * put a working example * fix api.md * be more compatible with main * align more to main --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Co-authored-by: Tim Treis <tim.treis@helmholtz-muenchen.de>
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