I created a docker build on an p4d.24xl (A100) and after the reads are read it bails out like this.
[00:25:50] Parsed 1961054 reads.
[00:00:10] Processing 1/? batch ⠐
[----------------------------------------] 0/30435 Could not load library libcudnn_cnn_infer.so.8. Error: libcuda.so: cannot open shared object file: No such file or directory
I started like this:
herro inference --read-alns batches/ -t 3 -d 0,1,2,3 -m model_R10_v0.1.pt -b 32 xxxx.fq xxxx_herro_output.fasta
I found the cuda.so file in /usr/local/cuda-11.7/compat/libcuda.so so I am currently adding to LD_LIBRARY_PATH to pick that one up.
I created a
docker buildon an p4d.24xl (A100) and after the reads are read it bails out like this.I started like this:
I found the
cuda.sofile in/usr/local/cuda-11.7/compat/libcuda.soso I am currently adding toLD_LIBRARY_PATHto pick that one up.