Skip to content

Releases: kbase/execution_engine2

0.0.15

Choose a tag to compare

@bio-boris bio-boris released this 07 Nov 23:13
0c28c57

What's Changed

0.0.15

  • Update JobRunner and Execution Engine to substitute internal urls to go through cloudflare only at NERSC

Full Changelog: 0.0.14...0.0.15

0.0.14

Choose a tag to compare

@bio-boris bio-boris released this 29 Aug 15:54
d5786fc

0.0.14

  • Update clients to work with mongo7 by updating pymongo and mongoengine
  • Fix linting issues from flake8 and black
  • Update outdated libraries that can no longer be pip installed
  • The latest Dockerfile build contains conda which installs python 3.12.4 so these changes will pin python to 3.10 and save us headache in the future
  • Speed up tests by moving docker build step out
  • Create matrix of tests to run against mongo3.6 and mongo7

Full Changelog: https://github.com/kbase/execution_engine2/commits/0.0.14

0.0.13

Choose a tag to compare

@bio-boris bio-boris released this 09 Jun 19:52
60557e6

Update version

0.0.12

Choose a tag to compare

@bio-boris bio-boris released this 07 Jun 22:17
8a21293

0.0.12

Forcing black to 22.1.0 to make sure that GHA doesn't suddenly fail
Prevent jobs that never ran from submitting job execution stats

0.0.11

Add ability for kbase user to contact condor via token

0.0.10

Fixes bug with ee2 not recording all jobs with the catalog during the process
of finishing a job
Updates GHA with black and flake8
Fix flake8 and black formatting issues by formatting MANY files
Updated docs for installing htcondor
Update many python libs in requirements.txt

0.0.9

Choose a tag to compare

@bio-boris bio-boris released this 24 Jun 20:35
9719893

execution_engine2 (ee2) release notes

0.0.9

  • Update GHA with latest actions, remove old actions
  • Change job defaults to result in
  • NJS and KB_UPLOAD 5 Jobs
  • Bigmem nodes with 250GB of ram take 1 job
  • Bigmem nodes with 1TB of ram take 4 jobs
  • Remove Jars from built image / cleanup for trivy

0.0.81

  • Updated HTCondor Clients, New Base Image
  • Use default GH actions
  • Updated precommit hooks

0.0.8

  • Fixed a bug that could, seemingly rarely, cause job and log updates to be applied to the
    wrong Mongo collection.
  • Removed docker shaded jar that causes log4j scan to appear positive with Trivy

0.0.7

  • Fixed a bug that could cause missing queued timestamps if many jobs were submitted in a
    batch

0.0.6

  • Release of MVP

Full Changelog: 0.0.8...0.0.9

0.0.8

Choose a tag to compare

@bio-boris bio-boris released this 19 Jan 20:58
9ecb3b3

0.0.8

Fixed a bug that could, seemingly rarely, cause job and log updates to be applied to the wrong Mongo collection.
Removed docker shaded jar that causes log4j scan to appear positive with Trivy

0.0.7

Choose a tag to compare

@bio-boris bio-boris released this 20 Dec 22:11
2b8abde
  • Bug fix on queued timestamp

0.0.6

Choose a tag to compare

@bio-boris bio-boris released this 03 Nov 19:08
1e268df

Release for MVP of DU

0.0.5

0.0.5 Pre-release
Pre-release

Choose a tag to compare

@bio-boris bio-boris released this 14 Jul 17:34
8d4299f
  • Added new endpoints for DATAUP
  • Refactored tests, models, and methods

0.0.4

0.0.4 Pre-release
Pre-release

Choose a tag to compare

@bio-boris bio-boris released this 04 Jan 16:55
3800987
  • Added dev environment fixes
  • Removed dependency on slack
  • Added new batch endpoints