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Building foundation models for lives
🧬
Building foundation models for lives
30 followers · 55 following
  • Stanford University
  • CA

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

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chansigit/README.md

Sijie's Github Repository

Hi there 👋 Welcome to my GitHub repository.

  • I’m currently working as a postdoc fellow at Xing Lab Stanford University, focusing on generative machine learning for biomedical systems.
  • I’m looking to collaborate on building foundation models for single-cell omics and molecular structure data.
  • I’m currently learning Chinese food cooking and Aquascaping. Glad to exchange plants and fishes at Bay Area.

View my resesarch publications here

Pinned Loading

  1. torchgw torchgw Public

    TorchGW — Fast Sampled Gromov-Wasserstein optimal transport in pure PyTorch. GPU-accelerated with Triton fused Sinkhorn kernels. 3-175x faster than POT.

    Python 2

  2. sjanpy sjanpy Public

    sjanpy is an extension toolkit of scanpy, providing user-friendly single-cell data analysis functions

    Python 5

  3. D2R_codes D2R_codes Public

    C++ 3 1

  4. scSnippet scSnippet Public

    My own code repository for single-cell analysis

    Jupyter Notebook 7 1

  5. studypaper studypaper Public

    paper-deepstudy: deep paper study plugin for ML and computational biology

    Shell 1

  6. fanguolai fanguolai Public

    Reverse mouse scroll wheel direction on macOS without affecting trackpad

    Swift 3 1