SDAP-505: Support DOMS insitu API

[stephenykp]

• Cast platform to string. SDAP requires platform to be a string (db col is str) but the DOMS insitu API seems to return an integer.
• Add mechanism for not supporting insitu schema. As far as I know no schema endpoint exists in DOMS, so in this case we'd set the schema endpoint to None.
• Removed cloud insitu nodes from conf. Added DOMS insitu nodes

---

Testing

All testing was done on a local instance of SDAP where Cass/Solr are running locally via Docker. I ingested AVHRR_OI_L4_GHRSST_NCEI 2018-08-01 - 2018-08-16 data prior to running this test.

Test query:

localhost:8083/match_spark?primary=AVHRR_OI_L4_GHRSST_NCEI&secondary=SAMOS&startTime=2018-08-01T00%3A00%3A00Z&endTime=2018-08-01T23%3A59%3A59Z&b=-122%2C%2026%2C%20-114%2C%2034&platforms=30&depthMin=-1&depthMax=1&tt=43200&rt=18750&matchOnce=true&prioritizeDistance=true

Job completes successfully. Results (JSON /cdmsresults endpoint)

{
	"executionId": "fe87f866-a415-494e-851a-7a666fdfe5f3",
	"data": [{
		"platform": "orbiting satellite",
		"device": "radiometers",
		"lon": "-117.375",
		"lat": "32.625",
		"point": "Point(-117.375 32.625)",
		"time": 1533081600,
		"depth": null,
		"fileurl": "20180801120000-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc",
		"id": "9793ad5b-5d06-3163-95b2-b5f020280044[[0, 90, 50]]",
		"source": "AVHRR_OI_L4_GHRSST_NCEI",
		"primary": [{
			"variable_name": "analysed_sst",
			"cf_variable_name": "sea_surface_temperature",
			"variable_value": 23.899993896484375,
			"variable_unit": null
		}],
		"matches": [{
			"platform": "30",
			"device": null,
			"lon": "-117.2368",
			"lat": "32.7076",
			"point": "Point(-117.237 32.708)",
			"time": 1533081240,
			"depth": -99999,
			"fileurl": null,
			"id": "WSQ2674_20180731v20001_1434-99999.0@-99999.0",
			"source": "SAMOS",
			"secondary": [{
				"variable_name": "relative_humidity",
				"cf_variable_name": "relative_humidity",
				"variable_value": 71,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity_quality",
				"cf_variable_name": "relative_humidity_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature",
				"cf_variable_name": "sea_water_temperature",
				"variable_value": 23.2,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature_quality",
				"cf_variable_name": "sea_water_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}]
		}]
	}, {
		"platform": "orbiting satellite",
		"device": "radiometers",
		"lon": "-117.125",
		"lat": "32.625",
		"point": "Point(-117.125 32.625)",
		"time": 1533081600,
		"depth": null,
		"fileurl": "20180801120000-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc",
		"id": "9793ad5b-5d06-3163-95b2-b5f020280044[[0, 90, 51]]",
		"source": "AVHRR_OI_L4_GHRSST_NCEI",
		"primary": [{
			"variable_name": "analysed_sst",
			"cf_variable_name": "sea_surface_temperature",
			"variable_value": 24.410003662109375,
			"variable_unit": null
		}],
		"matches": [{
			"platform": "30",
			"device": null,
			"lon": "-117.2367",
			"lat": "32.7076",
			"point": "Point(-117.237 32.708)",
			"time": 1533077340,
			"depth": -99999,
			"fileurl": null,
			"id": "WSQ2674_20180731v20001_1369-99999.0@-99999.0",
			"source": "SAMOS",
			"secondary": [{
				"variable_name": "relative_humidity",
				"cf_variable_name": "relative_humidity",
				"variable_value": 72.8,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity_quality",
				"cf_variable_name": "relative_humidity_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature",
				"cf_variable_name": "sea_water_temperature",
				"variable_value": 23.2,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature_quality",
				"cf_variable_name": "sea_water_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}]
		}]
	}],
	"params": {
		"primary": "AVHRR_OI_L4_GHRSST_NCEI",
		"matchup": "SAMOS",
		"startTime": 1533081600,
		"endTime": 1533167999,
		"bbox": "-122, 26, -114, 34",
		"timeTolerance": 43200,
		"radiusTolerance": 18750,
		"platforms": "30",
		"parameter": null,
		"depthMin": -1,
		"depthMax": 1
	},
	"bounds": {},
	"count": 2,
	"details": {
		"timeToComplete": 9,
		"numSecondaryMatched": 2,
		"numPrimaryMatched": 2,
		"numUniqueSecondaries": 2,
		"pageNum": 1,
		"pageSize": 1000
	}
}

Have not yet tested NCAR insitu endpoint.

[stephenykp]

Updated NCAR insitu api url, tested like so:

localhost:8083/match_spark?primary=AVHRR_OI_L4_GHRSST_NCEI&secondary=ICOADS Release 3.0&startTime=2018-08-01T00%3A00%3A00Z&endTime=2018-08-01T23%3A59%3A59Z&b=-122%2C%2026%2C%20-114%2C%2034&platforms=30&depthMin=-1&depthMax=1&tt=43200&rt=18750&matchOnce=true&prioritizeDistance=true

Job completes successfully. Results (JSON /cdmsresults endpoint w/pageSize=2)

{
	"executionId": "8185d41f-c3af-4291-bbaa-ab46e80abe7f",
	"data": [{
		"platform": "orbiting satellite",
		"device": "radiometers",
		"lon": "-117.125",
		"lat": "32.625",
		"point": "Point(-117.125 32.625)",
		"time": 1533081600,
		"depth": null,
		"fileurl": "20180801120000-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc",
		"id": "9793ad5b-5d06-3163-95b2-b5f020280044[[0, 90, 51]]",
		"source": "AVHRR_OI_L4_GHRSST_NCEI",
		"primary": [{
			"variable_name": "analysed_sst",
			"cf_variable_name": "sea_surface_temperature",
			"variable_value": 24.410003662109375,
			"variable_unit": null
		}],
		"matches": [{
			"platform": "WSQ2674",
			"device": null,
			"lon": "-117.2",
			"lat": "32.7",
			"point": "Point(-117.200 32.700)",
			"time": 1533081600,
			"depth": -99999,
			"fileurl": null,
			"id": "https://rda.ucar.edu/php/icoadsuid.php?uid=YP9J5K@-99999.0",
			"source": "ICOADS Release 3.0",
			"secondary": [{
				"variable_name": "air_pressure_quality",
				"cf_variable_name": "air_pressure_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "air_temperature",
				"cf_variable_name": "air_temperature",
				"variable_value": 24.7,
				"variable_unit": null
			}, {
				"variable_name": "air_temperature_quality",
				"cf_variable_name": "air_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "dew_point_temperature",
				"cf_variable_name": "dew_point_temperature",
				"variable_value": 19.9,
				"variable_unit": null
			}, {
				"variable_name": "dew_point_temperature_quality",
				"cf_variable_name": "dew_point_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity",
				"cf_variable_name": "relative_humidity",
				"variable_value": 74.7,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity_quality",
				"cf_variable_name": "relative_humidity_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_salinity_quality",
				"cf_variable_name": "sea_water_salinity_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature",
				"cf_variable_name": "sea_water_temperature",
				"variable_value": 23.3,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature_quality",
				"cf_variable_name": "sea_water_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "wet_bulb_temperature_quality",
				"cf_variable_name": "wet_bulb_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wind_speed",
				"cf_variable_name": "wind_speed",
				"variable_value": 1.5,
				"variable_unit": null
			}, {
				"variable_name": "wind_speed_quality",
				"cf_variable_name": "wind_speed_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "wind_from_direction",
				"cf_variable_name": "wind_from_direction",
				"variable_value": 270,
				"variable_unit": null
			}, {
				"variable_name": "wind_from_direction_quality",
				"cf_variable_name": "wind_from_direction_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "northward_wind",
				"cf_variable_name": "northward_wind",
				"variable_value": 1.5,
				"variable_unit": null
			}, {
				"variable_name": "wind_component_quality",
				"cf_variable_name": "wind_component_quality",
				"variable_value": 1,
				"variable_unit": null
			}]
		}, {
			"platform": "WSQ2674",
			"device": null,
			"lon": "-117.2",
			"lat": "32.7",
			"point": "Point(-117.200 32.700)",
			"time": 1533081600,
			"depth": 0,
			"fileurl": null,
			"id": "https://rda.ucar.edu/php/icoadsuid.php?uid=YP9J5K@0.0",
			"source": "ICOADS Release 3.0",
			"secondary": [{
				"variable_name": "air_pressure",
				"cf_variable_name": "air_pressure",
				"variable_value": 1013.4,
				"variable_unit": null
			}, {
				"variable_name": "air_pressure_quality",
				"cf_variable_name": "air_pressure_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "air_temperature_quality",
				"cf_variable_name": "air_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "dew_point_temperature_quality",
				"cf_variable_name": "dew_point_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity_quality",
				"cf_variable_name": "relative_humidity_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_salinity_quality",
				"cf_variable_name": "sea_water_salinity_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature_quality",
				"cf_variable_name": "sea_water_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wet_bulb_temperature_quality",
				"cf_variable_name": "wet_bulb_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wind_speed_quality",
				"cf_variable_name": "wind_speed_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wind_from_direction_quality",
				"cf_variable_name": "wind_from_direction_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wind_component_quality",
				"cf_variable_name": "wind_component_quality",
				"variable_value": 9,
				"variable_unit": null
			}]
		}]
	}, {
		"platform": "orbiting satellite",
		"device": "radiometers",
		"lon": "-120.375",
		"lat": "27.875",
		"point": "Point(-120.375 27.875)",
		"time": 1533081600,
		"depth": null,
		"fileurl": "20180801120000-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc",
		"id": "9793ad5b-5d06-3163-95b2-b5f020280044[[0, 71, 38]]",
		"source": "AVHRR_OI_L4_GHRSST_NCEI",
		"primary": [{
			"variable_name": "analysed_sst",
			"cf_variable_name": "sea_surface_temperature",
			"variable_value": 21.07000732421875,
			"variable_unit": null
		}],
		"matches": [{
			"platform": "VRDK7",
			"device": null,
			"lon": "-120.3",
			"lat": "27.8",
			"point": "Point(-120.300 27.800)",
			"time": 1533099600,
			"depth": -99999,
			"fileurl": null,
			"id": "https://rda.ucar.edu/php/icoadsuid.php?uid=P32YWX@-99999.0",
			"source": "ICOADS Release 3.0",
			"secondary": [{
				"variable_name": "air_pressure_quality",
				"cf_variable_name": "air_pressure_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "air_temperature",
				"cf_variable_name": "air_temperature",
				"variable_value": 21,
				"variable_unit": null
			}, {
				"variable_name": "air_temperature_quality",
				"cf_variable_name": "air_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "dew_point_temperature",
				"cf_variable_name": "dew_point_temperature",
				"variable_value": 16.4,
				"variable_unit": null
			}, {
				"variable_name": "dew_point_temperature_quality",
				"cf_variable_name": "dew_point_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity",
				"cf_variable_name": "relative_humidity",
				"variable_value": 75,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity_quality",
				"cf_variable_name": "relative_humidity_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_salinity_quality",
				"cf_variable_name": "sea_water_salinity_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature",
				"cf_variable_name": "sea_water_temperature",
				"variable_value": 25,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature_quality",
				"cf_variable_name": "sea_water_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "wet_bulb_temperature",
				"cf_variable_name": "wet_bulb_temperature",
				"variable_value": 18,
				"variable_unit": null
			}, {
				"variable_name": "wet_bulb_temperature_quality",
				"cf_variable_name": "wet_bulb_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "wind_speed_quality",
				"cf_variable_name": "wind_speed_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "wind_from_direction_quality",
				"cf_variable_name": "wind_from_direction_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "wind_component_quality",
				"cf_variable_name": "wind_component_quality",
				"variable_value": 1,
				"variable_unit": null
			}]
		}, {
			"platform": "VRDK7",
			"device": null,
			"lon": "-120.3",
			"lat": "27.8",
			"point": "Point(-120.300 27.800)",
			"time": 1533099600,
			"depth": 0,
			"fileurl": null,
			"id": "https://rda.ucar.edu/php/icoadsuid.php?uid=P32YWX@0.0",
			"source": "ICOADS Release 3.0",
			"secondary": [{
				"variable_name": "air_pressure",
				"cf_variable_name": "air_pressure",
				"variable_value": 1017.1,
				"variable_unit": null
			}, {
				"variable_name": "air_pressure_quality",
				"cf_variable_name": "air_pressure_quality",
				"variable_value": 1,
				"variable_unit": null
			}, {
				"variable_name": "air_temperature_quality",
				"cf_variable_name": "air_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "dew_point_temperature_quality",
				"cf_variable_name": "dew_point_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "relative_humidity_quality",
				"cf_variable_name": "relative_humidity_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_salinity_quality",
				"cf_variable_name": "sea_water_salinity_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "sea_water_temperature_quality",
				"cf_variable_name": "sea_water_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wet_bulb_temperature_quality",
				"cf_variable_name": "wet_bulb_temperature_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wind_speed_quality",
				"cf_variable_name": "wind_speed_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wind_from_direction_quality",
				"cf_variable_name": "wind_from_direction_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "wind_component_quality",
				"cf_variable_name": "wind_component_quality",
				"variable_value": 9,
				"variable_unit": null
			}]
		}]
	}],
	"params": {
		"primary": "AVHRR_OI_L4_GHRSST_NCEI",
		"matchup": "ICOADS Release 3.0",
		"startTime": 1533081600,
		"endTime": 1533167999,
		"bbox": "-122, 26, -114, 34",
		"timeTolerance": 43200,
		"radiusTolerance": 18750,
		"platforms": "30",
		"parameter": null,
		"depthMin": -1,
		"depthMax": 1
	},
	"bounds": {},
	"count": 2,
	"details": {
		"timeToComplete": 10,
		"numSecondaryMatched": 44,
		"numPrimaryMatched": 20,
		"numUniqueSecondaries": 28,
		"pageNum": 1,
		"pageSize": 2
	}
}

[RKuttruff]

Looks good to me.
I'm assuming the new NCAR endpoint re-adds insitu support after the CDMS project went down?

[stephenykp]

Looks good to me. I'm assuming the new NCAR endpoint re-adds insitu support after the CDMS project went down?

Yes, we are now pointing to the DOMS insitu API FSU and NCAR are hosting since the AWS api is no longer running

[ngachung]

Instead of None would it work if we pull the schema from https://doms.jpl.nasa.gov/in_situ_schema.json ?

[stephenykp]

I'll try that out!

[stephenykp]

@ngachung Good news! It appears to have worked.

Tested like so:

localhost:8083/match_spark?primary=AVHRR_OI_L4_GHRSST_NCEI&secondary=ICOADS Release 3.0&startTime=2018-08-01T00%3A00%3A00Z&endTime=2018-08-01T23%3A59%3A59Z&b=-122%2C%2026%2C%20-114%2C%2034&platforms=30&depthMin=-1&depthMax=1&tt=43200&rt=18750&matchOnce=true&prioritizeDistance=true
Job completes successfully. Results (JSON /cdmsresults endpoint w/pageSize=2)

{
	"executionId": "b28d7755-e8f6-418d-a48d-0adef8d9bc62",
	"data": [{
		"platform": "orbiting satellite",
		"device": "radiometers",
		"lon": "-116.625",
		"lat": "30.125",
		"point": "Point(-116.625 30.125)",
		"time": 1533081600,
		"depth": null,
		"fileurl": "20180801120000-NCEI-L4_GHRSST-SSTblend-AVHRR_OI-GLOB-v02.0-fv02.0.nc",
		"id": "9793ad5b-5d06-3163-95b2-b5f020280044[[0, 80, 53]]",
		"source": "AVHRR_OI_L4_GHRSST_NCEI",
		"primary": [{
			"variable_name": "analysed_sst",
			"cf_variable_name": "sea_surface_temperature",
			"variable_value": 20.839996337890625,
			"variable_unit": null
		}],
		"matches": [{
			"platform": "VRRD7",
			"device": null,
			"lon": "-116.7",
			"lat": "30.0",
			"point": "Point(-116.700 30.000)",
			"time": 1533124800,
			"depth": -99999,
			"fileurl": null,
			"id": "https://rda.ucar.edu/php/icoadsuid.php?uid=YP8UR2@-99999.0",
			"source": "ICOADS Release 3.0",
			"secondary": [{
				"variable_name": "air_pressure_quality",
				"cf_variable_name": "air_pressure_quality",
				"variable_value": 9,
				"variable_unit": null
			}, {
				"variable_name": "air_temperature",
				"cf_variable_name": "air_temperature",
				"variable_value": 21,
				"variable_unit": "C"
			}, {
				"variable_name": "air_temperature_quality",
				"cf_variable_name": "air_temperature_quality",
				"variable_value": 1,
				"variable_unit": null
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}

[ngachung]

Lgtm. Thank you!!