Removes unused routines

minimisers/DREAM/functions/setupDREAM.m

@@ -19,16 +19,6 @@
 rng('default');
 %randn('state', sum(100*clock));     % random number generator state
 
-
-% Now make sure that all strings are lower case --> **TURNS OUT THIS BREAKS
-% THINGS IF IMPLEMENTED!**
-% for i = 1 : numel(field_names)
-%     % evalstr = strcat('DREAMPar.',field_names(i),' = lower(DREAMPar.',field_names(i),');');
-%     % Now evaluate
-%     %eval(char(evalstr));
-%     DREAMPar = lowerCaseStruct(DREAMPar);
-% end
-
 % Do an initial copy of all set fields from DREAMPar to outDREAMPar....
 setFieldNames = {'nParams','nChains','nGenerations','parallel','CPU','jumpProbability','pUnitGamma'};
 for i = 1:length(setFieldNames)

minimisers/NS/drawMCMC.m

@@ -157,8 +157,6 @@
 
         % get the likelihood of the new sample
         %likestart = tic;
-        % logLnew = likelihood(data, model, parnames, ...
-        %               loopCell(sc));
         logLnew = likelihood(data,sc);
         %likedur = toc(likestart);
         %fprintf(1, 'liketime = %.6f\n', likedur);

minimisers/NS/drawMultiNest.m

@@ -60,7 +60,6 @@
                 rescaledpnt = rescaleParameters(prior, pnt); 
 
                 % get new likelihood
-                % logL = likelihood(data, model, parnames, loopCell(rescaledpnt));
                 logL = likelihood(data,rescaledpnt);
             end
 

minimisers/NS/nestedSampler.m

@@ -105,7 +105,6 @@
 logL = zeros(nLive,1);
 extraparvals = [];
 for i=1:nLive
-    %parvals = loopCell(livepoints(i,:));
     parvals = livepoints(i,:);
     logL(i) = flike(data,parvals);
 end