98_Design_doc_plot bounds

[audreyyeoCH]

Design doc for issue #98

[audreyyeoCH]

Hi @danielinteractive , I started with a design doc even though there are no helper functions, so I can work on it piece by piece. I initially started without a design doc, hence I changed @params to @typed. Thanks for your review!

and this is an example :

coords <- boundsPredprob(
    looks = c(10, 20, 30, 40),
    p0 = 0.20,
    tT = 0.80,
    phiL = 0.10,
    phiU = 0.90,
  )
new_plotBounds(coords)

[github-actions]

Code Coverage Summary

Filename                 Stmts    Miss  Cover    Missing
---------------------  -------  ------  -------  -----------
R/betadiff.R                78       0  100.00%
R/boundsPostprob.R          44       0  100.00%
R/boundsPredprob.R          56       1  98.21%   83
R/dbetabinom.R              99       3  96.97%   32, 62, 154
R/oc2.R                    162     162  0.00%    93-326
R/oc3.R                    146     146  0.00%    91-308
R/ocPostprob.R             117       0  100.00%
R/ocPostprobDist.R         122       0  100.00%
R/ocPredprob.R             205       0  100.00%
R/ocPredprobDist.R         257       5  98.05%   363-367
R/ocRctPostprobDist.R      174       0  100.00%
R/ocRctPredprobDist.R      302       0  100.00%
R/plotBeta.R                97       9  90.72%   124-132
R/plotBounds.R              83      83  0.00%    43-131
R/plotDecision.R            73       0  100.00%
R/plotOc.R                  55       2  96.36%   99-100
R/postprob.R                34       1  97.06%   113
R/postprobDist.R            77       1  98.70%   204
R/predprob.R                36       0  100.00%
R/predprobDist.R           140       1  99.29%   269
R/runShinyPhase1b.R          4       4  0.00%    8-13
R/sumBetaDiff.R             80      15  81.25%   102-120
R/sumTable.R                36       0  100.00%
TOTAL                     2477     433  82.52%

Diff against main

Filename          Stmts    Miss  Cover
--------------  -------  ------  --------
R/plotBounds.R      +31     +31  +100.00%
TOTAL               +31     +31  -1.05%

Results for commit: 9c0c4d2

Minimum allowed coverage is 80%

♻️ This comment has been updated with latest results

[github-actions]

Unit Test Performance Difference

Test Suite	$Status$	Time on main	$±Time$	$±Tests$	$±Skipped$	$±Failures$	$±Errors$
plotOc	💔	$208.48$	$+3.02$	$0$	$0$	$0$	$0$

Additional test case details

Test Suite	$Status$	Time on main	$±Time$	Test Case
plotOc	💔	$102.32$	$+1.39$	plotOc_gives_expected_results_for_ocPredprobDist_with_different_relativeDelta_status

Results for commit b76252f

♻️ This comment has been updated with latest results.

[danielinteractive]

Thanks @audreyyeoCH , please see below

[audreyyeoCH]

closing this PR as renaming local branch created new origin, fyi @danielinteractive